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View Structure Prediction Details

Protein: UTR5B_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTR5B_ARATH.

Description E-value Query
Range
Subject
Range
gi|51969060, gi|... - gi|51969064|dbj|BAD43224.1| unnamed protein product [Arabidopsis thaliana], gi|51969060|dbj|BAD43222...
158.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF  60
   61 CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT TTCQYEALKY VSFPVQTLAK 120
  121 CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.02
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [171-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGRENTVWGV SLMAGYLGFD GFTSTFQDKL FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ  60
   61 GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML 120
  121 SCIWFSHPLS WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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