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View Structure Prediction Details

Protein: gi|109134191, gi...
Organism: Arabidopsis thaliana
Length: 53 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|109134191, gi....

Description E-value Query
Range
Subject
Range
gi|42822049, gi|... - gi|42822049|tpg|DAA02279.1| TPA_exp: DVL8 [Arabidopsis thaliana], gi|145332865|ref|NP_001078298.1| R...
71.0 [0..9] [52..34]
gi|92875673 - gi|92875673|gb|ABE83577.1| conserved hypothetical protein [Medicago truncatula]
63.0 [0..7] [47..47]
gi|115440997, gi... - gi|56784250|dbj|BAD81745.1| unknown protein [Oryza sativa Japonica Group], gi|115440997|ref|NP_00104...
58.0 [0..7] [46..36]

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Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPEENGTCE PCKTFGQKCS HVVKKQRAKF YILRRCIAML VCWHDQNHDR KDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.564 a.2.10 Epsilon subunit of F1F0-ATP synthase C-terminal domain
View Download 0.504 a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.501 a.2.19 Description not found.
View Download 0.463 a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.441 a.2.10 Epsilon subunit of F1F0-ATP synthase C-terminal domain
View Download 0.394 a.7.17 Description not found.
View Download 0.368 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.359 a.2.10 Epsilon subunit of F1F0-ATP synthase C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle