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View Structure Prediction Details

Protein: EDR1_ARATH
Organism: Arabidopsis thaliana
Length: 933 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for EDR1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA  60
   61 SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE KHQIRAATLL SLGSHQRMDS 120
  121 RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT 180
  181 PGFEAVVVNR PIDSSLHELL EIAECIALG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSTTSVSVLV QRLAELVTEH MGGSAEDSSI VLARWTEKSS EFKAALNTCV FPIGFVKIGI  60
   61 SRHRALLFKV LADSVRLPCR LVKGSHYTGN EDDAVNTIRL EDEREYLVDL MTDPGTLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2iepA
Description: No description for 2iepA was found.

Predicted Domain #3
Region A:
Residues: [328-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PADFASASNN TVEPCNSNGN KFPTAQFSND VPKLSEGEGS SHSSMANYSS SLDRRTEAER  60
   61 TDSSYPKVGP LRNIDYSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [406-933]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSSVTSSTQL ENNSSTAIGK GSRGAIIECS RTNMNIVPYN QNSEEDPKNL FADLNPFQNK  60
   61 GADKLYMPTK SGLNNVDDFH QQKNNPLVGR SPAPMMWKNY SCNEAPKRKE NSYIENLLPK 120
  121 LHRDPRYGNT QSSYATSSSN GAISSNVHGR DNVTFVSPVA VPSSFTSTEN QFRPSIVEDM 180
  181 NRNTNNELDL QPHTAAVVHG QQNDESHIHD HRKYTSDDIS TGCDPRLKDH ESTSSSLDST 240
  241 SYRNDPQVLD DADVGECEIP WNDLVIAERI GLGSYGEVYH ADWHGTEVAV KKFLDQDFSG 300
  301 AALAEFRSEV RIMRRLRHPN VVFFLGAVTR PPNLSIVTEF LPRGSLYRIL HRPKSHIDER 360
  361 RRIKMALDVA MGMNCLHTST PTIVHRDLKT PNLLVDNNWN VKVGDFGLSR LKHNTFLSSK 420
  421 STAGTPEWMA PEVLRNEPSN EKCDVYSFGV ILWELATLRL PWRGMNPMQV VGAVGFQNRR 480
  481 LEIPKELDPV VGRIILECWQ TDPNLRPSFA QLTEVLKPLN RLVLPTPQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 2h8hA
Description: No description for 2h8hA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle