| Protein: | UBP20_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP20_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
395.0 | [0..39] | [695..426] |
|
|
302.0 | [0..110] | [637..15] |
|
|
300.0 | [0..110] | [637..15] |
|
|
298.0 | [0..30] | [648..66] |
|
|
297.0 | [0..110] | [637..15] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN 60
61 NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC QIPIRNTSQA LDDIDDDIWG 120
121 DDDLPETRRP WTPNV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-476] |
1 11 21 31 41 51
| | | | | |
1 SPGFGSDDDD DNDDDNSKNE PRKSLFYGFR QEPEPVTGVG AGLWNLGNSC FLNSVFQCFT 60
61 HTVPLIESLL SFRYEVPCHC GNEFFCVIRA IRYHIEAALR PERCPIAPYF FFDNLNYFSP 120
121 DFQRYQQEDA HEFLQAFLEK LEICGSDRTS FRGDITSQDV FSGRLISGLR CCNCDYVSET 180
181 YEKSVGLSLE IEDVDTLGSA LESFTRVEKL DEQLTCDNCN EKVSKEKQLL LDKLPLVATF 240
241 HLKRFKNNGL YMEKIYKHVK IPLEIDLQPY MRNIQENEVS TKYHLYALVE HFGYSVAYGH 300
301 YSSYVRSAPK IWHHFDDSKV TRIDEDMVLS QDSYILFYAR E
|
| Detection Method: | |
| Confidence: | 57.39794 |
| Match: | 2gfoA |
| Description: | No description for 2gfoA was found. |
|
Region A: Residues: [477-695] |
1 11 21 31 41 51
| | | | | |
1 GTRWFSSVYE EMQPLVEASL LNSSPKSVLD SSTNGECLSE ISYENGDKAS KPCDSAGVCN 60
61 QHVKTKEDFV SLSNDDVFLS AESSSGEESP MGELLDPLDP DDSYSPCTEK ESDSCLAIER 120
121 ATIRDDFFPL LLDQNQESST SSPKLQERTF EMQLLQMEET TKSQEPWKQP LSSISNIADS 180
181 MEAEFVYGDL MKKPSPRARE LLDQAISTNG SPPKKLKTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
