| Protein: | HEM12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEM12_ARATH.
| Description | E-value | Query Range |
Subject Range |
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468.0 | [0..1] | [530..1] |
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420.0 | [0..1] | [530..1] |
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411.0 | [0..1] | [530..1] |
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396.0 | [0..41] | [529..31] |
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395.0 | [0..68] | [529..84] |
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Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MAVSSAFVVT PKLEKLLANH HNPTYSSSPA PLDVIGIRAL PMNNRNKRGL IQRARCEISP 60
61 SNKAASISAL EQLKTSAIDR YTK
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.753 | a.39.1 | EF-hand |
| View | Download | 0.711 | a.39.1 | EF-hand |
| View | Download | 0.704 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.664 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.640 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.604 | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.591 | a.130.1 | Chorismate mutase II |
| View | Download | 0.565 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.521 | a.156.1 | S13-like H2TH domain |
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Region A: Residues: [84-530] |
1 11 21 31 41 51
| | | | | |
1 ERSSIVVIGL SIHTAPVEMR EKLAIPEAEW PRAIAELCGL NHIEEAAVLS TCNRMEIYVL 60
61 ALSQHRGVKE VTEWMSKTSG IPVSEICQHR FLLYNKDVTQ HIFEVSAGLD SLVLGEGQIL 120
121 AQVKQVVKVG QGVNGFGRNI SGLFKHAITV GKRVRTETNI AAGAVSVSSA AVELALMKLP 180
181 ESSHASSARM LVVGAGKMGK LVIKHLVAKG CTKMVVVNRS EEKVAAVRNE MPPGVEIIYK 240
241 PLDEMLSCAA EADVVFTSTA SETPLFLKEQ VETLPPVRDA RLFVDISVPR NVGSCVAEID 300
301 GTRVFNVDDL KEVVAANKED RVRKAMDAQA IITDESKHFE AWRDSLETVP TIKKLRGYTE 360
361 RIIAAEIEKS LPKMGIDMNK KMRKTVDDLI RGIVNKLLHG PMQHLRCDGN DSRTLSETLD 420
421 NMQALNRMYG LDAEILEEKI RAKVEKK
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| Detection Method: | |
| Confidence: | 59.522879 |
| Match: | 1gpjA |
| Description: | Glutamyl tRNA-reductase dimerization domain; Glutamyl tRNA-reductase middle domain; Glutamyl tRNA-reductase catalytic, N-terminal domain |
Matching Structure (courtesy of the PDB): |
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