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View Structure Prediction Details

Protein: gi|42571453
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571453.

Description E-value Query
Range
Subject
Range
gi|30313359 - gi|30313359|gb|AAL46934.3|AF446089_1 aminoalcoholphosphotransferase [Brassica rapa subsp. pekinensis...
294.0 [0..4] [344..47]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAVSVITLM GFMFLVTSSL LGYIYSPQLD SPPPRWVHFA HGLLLFLYQT FDAVDGKQAR  60
   61 RTNSSSPLGE LFDHGCDALA CAFEAMAFGS TAMCGRDTFW FWVISAIPFY GATWEHYFTN 120
  121 TLILPVINGP TEGLALIFVS HFFTAIVGAE WWAQQLGQSI PLFSWVPFVN EIQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.657577
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [174-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSRAVLYMMI AFAVIPTVAF NVTNVYKVVR SRNGSMVLAL AMLYPFVVLL GGVLIWDYLS  60
   61 PINLIATYPH LVVLGTGLAF GFLVGRMILA HLCDEPKGLK TNMCMSLLYL PFALANALTA 120
  121 RLNAGVPLVD ELWVLLGYCI FTVSLYLHFA TSVIHEITEA LGIYCFRITR KEA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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