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View Structure Prediction Details

Protein: PII2_ARATH
Organism: Arabidopsis thaliana
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PII2_ARATH.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
330.0 [0..2] [423..165]

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Predicted Domain #1
Region A:
Residues: [1-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWQTFFSSL LLLSLLFGCN GDESLPEVTD SEEAPMDKRE REALYSAIQG FVGDSWNGSA  60
   61 LYPDPCGWTP IQGVSCDIYN DLWYVTDLSL GLIYENSLPC SSSLQIRPEL FELKHLRSLS 120
  121 FFNCFISPMV IAKEELWTNF ASNLESLEFR SNPGLIGELP ETIGNLTKLK SLVVLENGFS 180
  181 GELPASICNL KRLKRLVFAG NSFAGMIPNC FKGLKELLIL DLSRNSFSGT LPTSFGDLVS 240
  241 LLKLDLSNNL LEGNLPQELG FLKNLTLLDL RNNRFSGGLS KNIENIQSLT ELVLSNNPMG 300
  301 EEDMVGTNWG KMSNLVVLDL SKMGLRGEIP TSLTNLKRLR FLGLNNNNLT GFVPSKKLEA 360
  361 LPCLGALYIN GNNLTGELRF STKFYEKMGR RFKASKNPNL CQPLEMVMSE SHKHLSPLGV 420
  421 KPCT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle