| Protein: | gi|15217788, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217788, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
157.0 | [0..46] | [240..16] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MKKSSPLLCF SLALFSLLSS PSSSTRIISS IVPSAAPSPA VAPTTDGDVD ENDFSAFTQW 60
61 NILNLTDLKS TFKNLPDF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.568 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.510 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.462 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.459 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.448 | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [79-242] |
1 11 21 31 41 51
| | | | | |
1 SKLNISSLHV SPAVGSVCSN TDYAAECIVS ILPLLRDFRK FEPKPIDVLR MEMSALYEKA 60
61 NATLDLAKRL IVDKSTPRDV ADVLDLCVDN YESLLDDLKD ASVAVDDGDF ERLESVVSAA 120
121 IADVVTCSDA FAESSELESP MANVDDFLKK LCSNVLAISQ MIHM
|
| Detection Method: | |
| Confidence: | 24.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
