YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: KEULE_ARATH
Organism: Arabidopsis thaliana
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KEULE_ARATH.

Description E-value Query
Range
Subject
Range
KEULE_ARATH, KEU... - (Q9C5X3) SNARE-interacting protein KEULE, SNARE-interacting protein KEULE - Arabidopsis thaliana (Mo...
595.0 [0..1] [666..1]

Back

Predicted Domain #1
Region A:
Residues: [1-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSDSDSSS HGGEYKNFRQ ITRERLLYEM LRSAKTGSSK STWKVLIMDK LTVKIMSYAC  60
   61 KMADITQEGV SLVEDIFRRR QPLPSMDAIY FIQPTKENVI MFLSDMSGKS PLYKKAFVFF 120
  121 SSPVSKELVG HIKKDSSVLP RIGALREMNL EFFAIDSQGF ITDHERALED LFGDEETSRK 180
  181 GDACLNVMAS RIATVFASLR EFPAVRYRAA KSLDASTMTT LRDLIPTKLA AGIWNCLAKH 240
  241 KQSIENFPQT ETCELLILDR SIDQIAPVIH EWTYDAMCHD LLNMEGNKYV HVIPSKSGGQ 300
  301 PEKKDVLLEE HDPIWLELRH AHIADASERL HDKMTNFLSK NKAAQLQGKR DGAELSTRDL 360
  361 QKMVQALPQY SEQIDKLSLH VEIARKLNDL IREQGLRELG QLEQDLVFGD AGMKDVIKYL 420
  421 STQEEASREG KLRLLMILAT IYPEKFEGEK GQNLMKLAKL SSDDMTAVNN MSLLGSAVDA 480
  481 KKNTPGGFTL KFDLHKKKRA VRKERQEEAA WQLSRFYPMI EELIEKLSKG ELPKEDFPCM 540
  541 NDPSPSFHGS TSLSSAASSS QGQAAQSMRS RRTPTWAKPR GSDDGYSSDS VLRHASSDFR 600
  601 KMGQRIFVFI VGGATRSELK VCHKLSTKLK REVILGSTSL DDPPQFITKL KLLTANDDLS 660
  661 LDDLQI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 140.0
Match: 1epuA
Description: Neuronal Sec1, NSec1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle