| Protein: | PME18_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 557 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME18_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..1] | [557..1] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MSNSNQPLLS KPKSLKHKNL CLVLSFVAIL GSVAFFTAQL ISVNTNNNDD SLLTTSQICH 60
61 GAHDQDSCQA LLSEFTTLSL SKLNRLDLLH VFLKNSVWRL ESTMTMVSEA RIRSNGVRDK 120
121 AGFADCEEMM DVSKDRMMSS MEELRGGNYN LESYSNVHTW LSSVLTNYMT CLESISDVSV 180
181 NSKQIVKPQL EDLVSRARVA LAIFVSVLPA RDDLKMIISN RF
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [223-557] |
1 11 21 31 41 51
| | | | | |
1 PSWLTALDRK LLESSPKTLK VTANVVVAKD GTGKFKTVNE AVAAAPENSN TRYVIYVKKG 60
61 VYKETIDIGK KKKNLMLVGD GKDATIITGS LNVIDGSTTF RSATVAANGD GFMAQDIWFQ 120
121 NTAGPAKHQA VALRVSADQT VINRCRIDAY QDTLYTHTLR QFYRDSYITG TVDFIFGNSA 180
181 VVFQNCDIVA RNPGAGQKNM LTAQGREDQN QNTAISIQKC KITASSDLAP VKGSVKTFLG 240
241 RPWKLYSRTV IMQSFIDNHI DPAGWFPWDG EFALSTLYYG EYANTGPGAD TSKRVNWKGF 300
301 KVIKDSKEAE QFTVAKLIQG GLWLKPTGVT FQEWL
|
| Detection Method: | |
| Confidence: | 111.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
