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View Structure Prediction Details

Protein: gi|42572147
Organism: Arabidopsis thaliana
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572147.

Description E-value Query
Range
Subject
Range
B3GT7_ARATH - Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1
311.0 [0..1] [387..1]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD  60
   61 CAHNKKATQE KDVTGEVLRT HEAI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDDRSLDKSV STLSSTRSSQ EMVDGSETNP RKKVFMVMGI NTAFSSRKRR DSVRETWMPQ  60
   61 GEKLERLEQE KGIVIKFMIG HSATSNSILD RAIDSEDAQH KDFLRLEHVE GYHELSAKTK 120
  121 IFFSTAVAKW DAEFYIKVDD DVHVNLGMLA STLARHRSKP RVYIGCMKSG PVLAQKTVKY 180
  181 HEPEYWKFGE DGNKYFRHAT GQIYAISKDL ANYISINQPI LHKYANEDVS LGSWFIGLEV 240
  241 EHIDDRNFCC GTPPDCRWKA EAGDVCVASF EWSCSGICKS VERMKIVHEV CSEGEGAVWN 300
  301 TLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
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