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View Structure Prediction Details

Protein: gi|18412725, gi|...
Organism: Arabidopsis thaliana
Length: 127 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18412725, gi|....

Description E-value Query
Range
Subject
Range
gi|21537144 - gi|21537144|gb|AAM61485.1| unknown [Arabidopsis thaliana]
180.0 [0..1] [116..1]
gi|92875263 - gi|92875263|gb|ABE83307.1| conserved hypothetical protein [Medicago truncatula]
77.0 [0..8] [113..20]
gi|115470114, gi... - gi|54291558|dbj|BAD62482.1| unknown protein [Oryza sativa Japonica Group], gi|54291357|dbj|BAD62123....
gi|218198928 - gi|218198928|gb|EEC81355.1| hypothetical protein OsI_24548 [Oryza sativa Indica Group]
49.0 [0..2] [94..33]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEELTQILKN NRTDDLTWFC SLSESELDLL ISLKKLAIQR AKISGHQELA DKFDLKLLRS  60
   61 LGLVLMEHAR KRVQNDTSLA PSVVHQLRLL DNCNLLKTHV DDAVDIEEIL TQICDNKSKK 120
  121 KARKRRR

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.805 d.134.1 Sulfite reductase hemoprotein (SiRHP), domains 2 and 4
View Download 0.747 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.702 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.702 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.640 a.24.4 Hemerythrin
View Download 0.633 a.24.18 Description not found.
View Download 0.598 a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle