| Protein: | AP2L3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 303 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP2L3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
214.0 | [0..1] | [303..1] |
|
|
182.0 | [0..8] | [280..215] |
|
|
181.0 | [0..40] | [295..132] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR 60
61 WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA YDLAALKYWG RDTLLNFPL
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [120-225] |
1 11 21 31 41 51
| | | | | |
1 PSYDEDVKEM EGQSKEEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFATQE 60
61 EAAIAYDIAA IEYRGLNAVT NFDVSRYLNP NAAADKADSD SKPIRS
|
| Detection Method: | |
| Confidence: | 3.67 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [226-303] |
1 11 21 31 41 51
| | | | | |
1 PSREPESSDD NKSPKSEEVI EPSTSPEVIP TRRSFPDDIQ TYFGCQDSGK LATEEDVIFD 60
61 CFNSYINPGF YNEFDYGP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.436 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.363 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.336 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.323 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.323 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.318 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.298 | a.118.1 | ARM repeat |
| View | Download | 0.223 | a.74.1 | Cyclin-like |
