| Protein: | gi|42563332 |
| Organism: | Arabidopsis thaliana |
| Length: | 1691 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42563332.
| Description | E-value | Query Range |
Subject Range |
|
|
1864.0 | [0..1] | [1654..1] |
|
Region A: Residues: [1-776] |
1 11 21 31 41 51
| | | | | |
1 MSGQVSNQGT MSQQNGNSQM QNLVGGGSAP ATGAGLGPSR VSPVDNDILK LRQAMRIRIF 60
61 NILQQKQPSP ADEASKAKYM DVARRLEEGL FKIANTKEDY VNPSTLEPRL ASLIKGRQLN 120
121 NYNQRHANSS SVGTMIPTPG LQHSGGNPNL MITSSGDATM AGSNNITTSA MNTGNLLNSG 180
181 GMLGGNLSNG YQHSSSNFGL GSGGNMSSMS SQRNTGQMMP TPGFVNSSTN NNSNNGQSYL 240
241 SVEASNNSGG FSTAPMMVPQ TQQQQLRQDI GGQNSRMLQN HGSQMGVGLR PGMQQKLSNV 300
301 SNSSINGGVG MNAKSVDSGT SYTNPIRNSQ QAYDNLQRSG MQGDGYGTNN SDPFGSGNLY 360
361 GAVTSVGMMT NTQNANTASF QAVSRTSSSL SHQQQQFQQQ PNRFQQQPNQ FHQQQQQFLH 420
421 QQQLKQQSQQ QQRFISHDAF GQNNVASDMV THVKHEPGME NPSESIHSQT PEQFQLSQFQ 480
481 NQYQNNAEDR HAGSQILPVT SQSDMCTSVP QNSQQIQQML HPHSMASDSV NGFSNLSVGV 540
541 KTESGMRGHW QSQSQEHTQM SNSMSNERHI QEDFRQRMSG TDEAQPNNMS GGSIIGQNRV 600
601 STTSESLNPQ NPTATTCRNG NGNRDPRFKN QQKWLLFLRH ARHCKAPEGK CPDRNCVTVQ 660
661 KLWKHMDSCA APQCSYPRCL PTKTLINHHR SCKEPNCPVC IPVKAYLQQQ ANARSLARLK 720
721 NETDAARSVN GGGISSDAVQ TSAGAKSCTS PGADISGHLQ PSLKRLKVEQ SSQPVD
|
| Detection Method: |  |
| Confidence: | 12.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [777-941] |
1 11 21 31 41 51
| | | | | |
1 VETESCKSSV VSVTEAQSSQ YAERKDHKHS DVRAPSKYFE VKAEVSDFSV QTRPGFKDTK 60
61 IGIAENIPKQ RPVSQPDKQD LSDVSPMQET TKVEKEPESL KKENLAESTE HTSKSGKPEI 120
121 KGVSLTELFT PEQVREHIRG LRQWVGQSKA KAEKNQAMEH SMSEN
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 1jspB |
| Description: | CREB-binding protein, CBP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [942-1081] |
1 11 21 31 41 51
| | | | | |
1 SCQLCAVEKL TFEPPPIYCT PCGARIKRNA MYYTVGAGDT RHYFCIPCYN ESRGDTILAE 60
61 GTPMPKARLE KKKNDEETEE WWVQCDKCEA WQHQICALFN GRRNDGGQAE YTCPYCFIAE 120
121 VEQSKRKPLP QSAVLGAKDL
|
| Detection Method: | |
| Confidence: | 13.39794 |
| Match: | 2f6jA |
| Description: | No description for 2f6jA was found. |
|
Region A: Residues: [1082-1197] |
1 11 21 31 41 51
| | | | | |
1 PRTILSDHIE QRLFKRLKQE RTERARAQGK SYDEIPTAES LVIRVVSSVD KKLEVKPRFL 60
61 EIFREDSYPT EFAYKSKVVL LFQKIEGVEV CLFGMYVQEF GSECAFPNQR RVYLSY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1198-1343] |
1 11 21 31 41 51
| | | | | |
1 LDSVKYFRPE VRSYNGEALR TFVYHEILIG YLEYCKLRGF TSCYIWACPP LKGEDYILYC 60
61 HPEIQKTPKS DKLREWYLAM LRKASKEGIV AETINLYDHF FMQTGECRAK VTAARLPYFD 120
121 GDYWPGAAED LIYQMSQEED GRKGNK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1344-1440] |
1 11 21 31 41 51
| | | | | |
1 KGMLKKTITK RALKASGQTD LSGNASKDLL LMHRLGETIH PMKEDFIMVH LQPSCTHCCI 60
61 LMVSGNRWVC SQCKHFQICD KCYEAEQRRE DRERHPV
|
| Detection Method: | |
| Confidence: | 2.84 |
| Match: | 2dipA |
| Description: | No description for 2dipA was found. |
| Term | Confidence | Notes |
| binding | 0.0159092335062434 | bayes_pls_golite062009 |
|
Region A: Residues: [1441-1558] |
1 11 21 31 41 51
| | | | | |
1 NFKDKHALYP VEIMDIPADT RDKDEILESE FFDTRQAFLS LCQGNHYQYD TLRRAKHSSM 60
61 MVLYHLHNPT APAFVTTCNA CHLDIETGQG WRCEVCPDYD VCNACFSRDG GVNHPHKL
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 1totA |
| Description: | ZZ Domain of CBP- a Novel Fold for a Protein Interaction Module |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [1559-1691] |
1 11 21 31 41 51
| | | | | |
1 TNHPSLADQN AQNKEARQLR VLQLRKMLDL LVHASQCRSA HCQYPNCRKV KGLFRHGINC 60
61 KVRASGGCVL CKKMWYLLQL HARACKESEC HVPRCRDLKE HLRRLQQQSD SRRRAAVMEM 120
121 MRQRAAEVAG GSG
|
| Detection Method: | |
| Confidence: | 34.0 |
| Match: | 1f81A |
| Description: | CREB-binding transcriptional adaptor protein CBP (p300) |
Matching Structure (courtesy of the PDB): |
|
