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View Structure Prediction Details

Protein: gi|222423834, gi...
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222423834, gi....

Description E-value Query
Range
Subject
Range
PYRG_CARHZ - CTP synthase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=pyrG ...
243.0 [0..3] [298..241]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRYICLPFF LLLWNDIGLA KEASESILLP SESGFDGSRS PVCSSPDPNL NYRPVIGILS  60
   61 HPGDGASGRL TNDTSSTYIA ASYVKFAEAG GARVIPLIYN EPEEVLFQKL ELVNGVIFTG 120
  121 GWAKKYDYFE IVKKIFTKAL ERNDAGEHFP VYGICLGFEL MSIIISQNRD ILERFDAEDN 180
  181 ASSLQFVDNV NNDGTLFQRF PPELLKKLST DCLVMQKHKY GITPANFQAN PALSSFFEIL 240
  241 TTCIDENSKT YVSTVKAKRY PITGFQWHPE KNAFEWGSSA IPHSEDAIQV TQHAASYLVS 300
  301 EARKSLNRPE SQKVLSNLIY NYKPTYCGYA GRGYDEVYIF TQPRSRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.39794
Match: 1l9xA
Description: gamma-glutamyl hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity 1.70348758031146 bayes_pls_golite062009
catalytic activity 1.30391542469987 bayes_pls_golite062009
binding 0.245374211061945 bayes_pls_golite062009
anthranilate synthase activity 0.243205818526006 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle