| Protein: | gi|18409643 |
| Organism: | Arabidopsis thaliana |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18409643.
| Description | E-value | Query Range |
Subject Range |
|
|
562.0 | [0..1] | [466..1] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG 60
61 YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD IKVIAGCGCP STDRKVVNSG 120
121 KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN 180
181 RACQTKLVED SVRKLLRESV AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC 240
241 TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL 300
301 RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT 360
361 KTWSFVEEES VKRCNGEEEE
|
| Detection Method: |  |
| Confidence: | 0.999 |
| Match: | 1gwsA |
| Description: | 16-heme cytochrome c HmcA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [381-466] |
1 11 21 31 41 51
| | | | | |
1 EEDGFMGFPV EGGRSNVSKS AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR 60
61 RNELLGNISD DGEMDDWFVS KQDRST
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.635 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.616 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.517 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.417 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.393 | a.77.1 | DEATH domain |
