| Protein: | gi|42572033 |
| Organism: | Arabidopsis thaliana |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572033.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..5] | [455..1] |
|
|
358.0 | [0..11] | [455..1] |
|
|
358.0 | [0..8] | [453..9] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MDVSMSFSQD MDNEYEKLIR RMNPPRVVID NDSCKKATVI RVDSANEYGI LLEVVQILTD 60
61 LNLTITKAYI SSDGGWFMDV FNVTDQDGNK VTDEVVLDYI QKSLGPEACF STSMRSVGVI 120
121 PSTDSTVIEL TGCDRPGLLS ELSAVLTHLK CSVLNAEIWT HNTRAAAVMQ VTDDLT
|
| Detection Method: |  |
| Confidence: | 10.221849 |
| Match: | 2nyiA |
| Description: | No description for 2nyiA was found. |
|
Region A: Residues: [177-244] |
1 11 21 31 41 51
| | | | | |
1 GCGISDPERL SRIKNLLRNV LKGSNTPREA KTVVSHGEVH TDRRLHQMMF EDRDYEHRLV 60
61 DDDSSIQD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.788 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.788 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.706 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.694 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.694 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.686 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.686 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.649 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.649 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.633 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [245-455] |
1 11 21 31 41 51
| | | | | |
1 ERQRPDVCVD NWLDKDYSVV TVRCKDRPKL LFDTVCTLTD MQYVVFHGSV DTEGTEAFQE 60
61 YYVRHIDGSP VKSEAEKQRV IQCLEAAIKR RVSEGLKLEL CTTDRVGLLS NVTRIFRENS 120
121 LTVTRAEVKT KGGKALNTFY VSDASGYSID AKTIDSIRQT IGQTILKVKN NPQEQQQRQK 180
181 SPSHESPTRF LFGGLFKSKS FVNFGLVRSY S
|
| Detection Method: | |
| Confidence: | 20.09691 |
| Match: | 1u8sA |
| Description: | Crystal structure of putative glycine cleavage system transcriptional repressor |
Matching Structure (courtesy of the PDB): |
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