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View Structure Prediction Details

Protein: DRP2A_ARATH
Organism: Arabidopsis thaliana
Length: 914 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for DRP2A_ARATH.

Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG  60
   61 HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ QVSASALRHS LQDRLSKGAS 120
  121 GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI 180
  181 SSSRALKIAK EYDPESTRTI GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI 240
  241 GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL 300
  301 RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.0
Match: 2akaB
Description: Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [355-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGEGSGWKVV ASFEGNFPNR IKQLPLDRHF DLNNVKRVVL EADGYQPYLI SPEKGLRSLI  60
   61 KIVLELAKDP ARLCVDEVHR VLVDIVSASA NATPGLGRYP PFKREVVAIA SAALDGFKNE 120
  121 AKKMVVALVD MERAFVPPQH FIRLVQRRME RQRREEELKG RSSKKGQDAE QSLLSRATSP 180
  181 QPDGPTAGGS LKSMKDKPSP QDKETPEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [563-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLKTAGPEG EITAGYLMKK SAKTNGWSRR WFVLNEKTGK LGYTKKQEER NFRGTITLEE  60
   61 CTIEEIPEDE VEKSKSSKDK KANGPDSKGP GLVFKITCKV PYKTVLKAHN ALVLKAESVV 120
  121 DKNEWINKLQ KVIQARGGQV GSVSMRQS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.721246
Match: PF00169.21
Description: No description for PF00169.21 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [711-819]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN  60
   61 QLYSSISAIG NERIESLIQE DQNVKRRRER YQKQSSLLSK LTRQLSIHD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.008774
Match: PF02212.10
Description: No description for PF02212.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [820-914]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRAAAASSYS DNSGTESSPR ASGGSSGDDW MNAFNSAANG PSDSLSKYGS GGHSRRYSDP  60
   61 AQNGDAASPG SGSNRRTTPN RLPPAPPPTG SAYRY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle