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View Structure Prediction Details

Protein: ALT4_ARATH
Organism: Arabidopsis thaliana
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALT4_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554006 - gi|21554006|gb|AAM63087.1| unknown [Arabidopsis thaliana]
176.0 [0..1] [185..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRVTGTAAP AMSVVFPTSW RQPVMLPLRS AKTFKPHTFL DLKGGKEMSE FHEVELKVRD  60
   61 YELDQFGVVN NAVYANYCQH GMHEFLESIG INCDEVARSG EALAISELTM NFLAPLRSGD 120
  121 KFVVKVNISR TSAARIYFDH SILKLPNQEV ILEAKATVVW LDNKHRPVRI PSSIRSKFVH 180
  181 FLRQNDTV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2av9A
Description: Crystal Structure of the Conserved Hypothetical Protein PA5185 from Pseudomonas Aeruginosa Strain PAO1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.350067167618188 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle