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View Structure Prediction Details

Protein: NAT10_ARATH
Organism: Arabidopsis thaliana
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT10_ARATH.

Description E-value Query
Range
Subject
Range
NAT6_ARATH - Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2
325.0 [0..6] [540..2]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNGGGGNNG AANRTEELQP HPVKEQLPGI QYCVNSPPPW LEAVVLGFQH YLLSLGITVL  60
   61 IPSVLVPLMG GGYAEKVKVI QTLLFVSGLT TLFQSFFGTR LPVIAVASYA YIIPITSIIY 120
  121 STRFTYYTDP FERFVRTMRS IQGALIITGC FQVLICILGV WRNIVRFLSP LSIAPLATFT 180
  181 GLGLYHIGFP LLARCVEVGL PGLILLIFVT QYLPRFLKMK K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [222-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVMILDGSRC DRYGMILCIP LVWLFAQLLT SSGVYDHKSH TTQTSCRTDR TGLITNTPWI  60
   61 YIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [285-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPFQWGSPTF DITDSFAMMA ASFVTLFEST GLFYASARYG SATPIPPSVV SRGTCWLGVG  60
   61 VLLNGMLGGI TGITTSTENV GLLAMTKIGS RRVIQISAAF MIFFSIFGKF GAFFASIPLP 120
  121 IMASLYCIVL CFVSSVGLSY LQFCNLNSFN IKFILGFSFF MAISIPQYFR EYYNGGWRSD 180
  181 HHSNWLEDMI RVIFMSHTTV AAIIAIVLDC TLCRDSDEAK KDCGMKWWDK FRLYNLDVRN 240
  241 DEFYGLPCRL NKFFPSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle