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View Structure Prediction Details

Protein: gi|30681482
Organism: Arabidopsis thaliana
Length: 977 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|30681482.

Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSLRNFNF FHRFSTFLVF SLFSVVSSDD LQVLLKLKSS FADSNLAVFD SWKLNSGIGP  60
   61 CSFIGVTCN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRGNVTEIDL SRRGLSGNFP FDSVCEIQSL EKLSLGFNSL SGIIPSDLKN CTSLKYLDLG  60
   61 NNLFSGAFPE FSSLNQLQFL YLNNSAFSGV FPWKSLRNAT SLVVLSLGDN PFDATADFPV 120
  121 EVVSLKKLSW LYLSNCSIAG KIPPAIGDLT ELRNLEISDS GLTGEIPSEI SKLTNLWQLE 180
  181 LYNNSLTGKL PTGFGNLKNL TYLDASTNLL QGDLSELRSL TNLVSLQMFE NEFSGEIPLE 240
  241 FGEFKDLVNL SLYTNKLTGS LPQGLGSLAD FDFIDASENL LTGPIPPDMC KNGKMKALLL 300
  301 LQNNLTGSIP ESYANCLTLQ RFRVSENNLN GTVPAGLWGL PKLEIIDIEM NNFEGPITAD 360
  361 IKNGKMLGAL YLGFNK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.154902
Match: 2id5A
Description: No description for 2id5A was found.

Predicted Domain #3
Region A:
Residues: [446-697]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSDELPEEIG DTESLTKVEL NNNRFTGKIP SSIGKLKGLS SLKMQSNGFS GEIPDSIGSC  60
   61 SMLSDVNMAQ NSISGEIPHT LGSLPTLNAL NLSDNKLSGR IPESLSSLRL SLLDLSNNRL 120
  121 SGRIPLSLSS YNGSFNGNPG LCSTTIKSFN RCINPSRSHG DTRVFVLCIV FGLLILLASL 180
  181 VFFLYLKKTE KKEGRSLKHE SWSIKSFRKM SFTEDDIIDS IKEENLIGRG GCGDVYRVVL 240
  241 GDGKEVAVKH IR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [698-977]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSSTQKNFSS AMPILTEREG RSKEFETEVQ TLSSIRHLNV VKLYCSITSD DSSLLVYEYL  60
   61 PNGSLWDMLH SCKKSNLGWE TRYDIALGAA KGLEYLHHGY ERPVIHRDVK SSNILLDEFL 120
  121 KPRIADFGLA KILQASNGGP ESTHVVAGTY GYIAPAEYGY ASKVTEKCDV YSFGVVLMEL 180
  181 VTGKKPIEAE FGESKDIVNW VSNNLKSKES VMEIVDKKIG EMYREDAVKM LRIAIICTAR 240
  241 LPGLRPTMRS VVQMIEDAEP CRLMGIVISK ESDVKVKEIS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle