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View Structure Prediction Details

Protein: TPS6_ARATH
Organism: Arabidopsis thaliana
Length: 860 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TPS6_ARATH.

Predicted Domain #1
Region A:
Residues: [1-585]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRSYSNLL ELASGDSPTF GRMNRQIPRI MAVAGIMSNI DNDSKDTDLS PKDRIIIVAN  60
   61 ELPIRAQRRV DGNGSGSSSS STCCSKGWNF SWDENSLLLQ LKDGLGDEAI EVIYVGCLKE 120
  121 EIPLNEQEEV YQILLESFKC VPTFLPLDLY TRYYHGFCKQ QLWPLFHYML PLSPDLGGRF 180
  181 DRTLWQAYVS VNKIFADRIM EVINPEDDFV WIHDYHLMVL PTFLRKRFNR VKLGFFLHSP 240
  241 FPSSEIYKTL PIREELLRAL LNSDLIGFHT FDYARHFLSC CSRMLGLTYE SKRGYIGLEY 300
  301 YGRTVSIKIL PVGIHMGQLQ SVLSLPETER KVGELIERYG RKGRTMLLGV DDMDIFKGIT 360
  361 LKLLAMEQLL MQHPEWQGKV VLVQIANPAR GKGKDVKEMQ AETYSTVKRI NETFGRPGYD 420
  421 PIVLIDAPLK FYERVAYYVV AECCLVTAVR DGMNLIPYEY IVSRQGNEKL DKILKLEANN 480
  481 RNKKSMLVVS EFIGCSPSLS GAIRVNPWNV DAVADAMDSA LEVAEPEKQL RHEKHYKYVS 540
  541 THDVGYWARS FLQDLERSCG EHGRRRCWGI GFGLSFRVVA LDQSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.30103
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [586-860]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKLSMEHIVS AYKRTKTRAI LLDYDDTLMP QGSIDKRPSS KSIDILNTLC RDKGNLVFIV  60
   61 SAKSRETLSD WFSPCEKLGI AAEHGYFLRL RKAVEWENCV AAVDCSWKQI AEPVMELYTE 120
  121 TTDGSTIEDK ETALVWSYED ADPDFGSCQA KELLDHLESV LANEPVTVKR GQNYVEVKPQ 180
  181 GVSKGLIARR MLSMMQERGT LPEFVLCIGD DRSDEDMFEV ICSSTEGPSI APRAEIFACT 240
  241 VGQKPSKAKY YLDDTTEIVR LMHGLASVTD QITPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle