| Protein: | CSK_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 611 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSK_ARATH.
| Description | E-value | Query Range |
Subject Range |
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356.0 | [0..1] | [611..1] |
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268.0 | [0..241] | [607..6] |
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262.0 | [0..59] | [609..248] |
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260.0 | [0..89] | [610..209] |
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260.0 | [0..68] | [610..759] |
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260.0 | [0..332] | [603..467] |
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258.0 | [0..228] | [601..344] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MLLSAIASQT LLSSNPNLHF SNSIPNPRPS NPSLKLLNAS SSSSSSSSSS IFTRGLRYVN 60
61 HTVSNEESEP GGGETMVASA SAIASAIRGA STTPVEFTQM IEKDHLKTKI ILPSPDFQRL 120
121 CLEQLDLFRQ IVDP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.517 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.517 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.516 | a.118.8 | TPR-like |
| View | Download | 0.516 | a.118.8 | TPR-like |
| View | Download | 0.483 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.483 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.446 | d.224.1 | SufE-like |
| View | Download | 0.446 | d.224.1 | SufE-like |
| View | Download | 0.436 | b.45.1 | FMN-binding split barrel |
| View | Download | 0.426 | a.74.1 | Cyclin-like |
| View | Download | 0.214 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.201 | d.163.1 | DNA breaking-rejoining enzymes |
|
Region A: Residues: [135-220] |
1 11 21 31 41 51
| | | | | |
1 NAVLSIYVRP AGSYVMDRLE LRRVTCYPSV NAGDVVILVG NFGIPAGLRA AEASLSSQQV 60
61 ELVSKHRAAV FPMVKHPFVV GFLVAE
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.774 | d.349.1 | Description not found. |
| View | Download | 0.737 | d.218.1 | Nucleotidyltransferase |
| View | Download | 0.702 | d.349.1 | Description not found. |
| View | Download | 0.685 | b.55.1 | PH domain-like |
| View | Download | 0.685 | b.55.1 | PH domain-like |
| View | Download | 0.676 | b.55.1 | PH domain-like |
| View | Download | 0.671 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.671 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.620 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.484 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.460 | b.55.1 | PH domain-like |
| View | Download | 0.424 | d.214.1 | Hypothetical protein MTH1880 |
| View | Download | 0.410 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.352 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
|
Region A: Residues: [221-338] |
1 11 21 31 41 51
| | | | | |
1 LPVEAEEEEE EEEEEKPHGV NQFLSPEEAY ALPASANTKS PRVKLPSVKV FTEEQRSYAI 60
61 NISRTLAMAY VMDQKTMLLQ QSSWQNNVRM SKLVEQIRGP LSTMRTLSKM LSTHTKRN
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.971 | a.47.2 | t-snare proteins |
| View | Download | 0.971 | a.47.2 | t-snare proteins |
| View | Download | 0.968 | a.47.1 | STAT |
| View | Download | 0.960 | a.7.1 | Spectrin repeat |
| View | Download | 0.960 | a.7.1 | Spectrin repeat |
| View | Download | 0.936 | a.7.1 | Spectrin repeat |
| View | Download | 0.932 | a.47.2 | t-snare proteins |
| View | Download | 0.932 | a.47.2 | t-snare proteins |
| View | Download | 0.932 | a.7.1 | Spectrin repeat |
| View | Download | 0.923 | a.7.1 | Spectrin repeat |
| View | Download | 0.677 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.633 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.627 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.607 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.600 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [339-611] |
1 11 21 31 41 51
| | | | | |
1 QISHDIVEDL IVQGDQIKDT LEELQDAVHL TKANIVRHNE EALKKINKTH NETRRSKYEH 60
61 KDPIDGSQIS STRLSLGSGL DDSEMPMPPL ALAPLQMHSI RPCDISNVLL DMVETVRPLA 120
121 LTQQRVVELG ENSASLQVAV EEPALRQALS NLIEGALLRT HVGGKVEILS TRAPAGGSLV 180
181 VIDDDGPDMR YMTQMHSLTP FGAELLSENM VEDNMTWNFV AGLTVAREIL ESYGCVIRVI 240
241 SPRSSDAALG AGGTRVELWL PAFPAAVSEA NEA
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| Detection Method: | |
| Confidence: | 53.69897 |
| Match: | 2c2aA |
| Description: | Structure of the entire cytoplasmic portion of a sensor histidine kinase protein |
Matching Structure (courtesy of the PDB): |
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