YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|67633480, gi|...
Organism: Arabidopsis thaliana
Length: 185 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|67633480, gi|....

Description E-value Query
Range
Subject
Range
gi|76678522 - gi|76678522|ref|XP_588377.2| PREDICTED: similar to SCCA2/SCCA1 fusion protein [Bos taurus]
179.0 [0..2] [181..218]

Back

Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDRDFHLI NGTSVSVSLM SSYKDQYIEA YDGFKVLKLP FRQGNDTSRN FSMHFYLPDE  60
   61 KDGLDNLVEK MASSVGFLDS HIPSQKVKVG EFGIPKFKIE FGFSASRAFN RLGLDEMALY 120
  121 QKACVEIDEE GAEAIAATAV VGGFGCAFVK RIDFVADHPF LFMIREDKTG TVLFVGQIFD 180
  181 PSYSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 2gd4I
Description: No description for 2gd4I was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle