| Protein: | gi|42571983 |
| Organism: | Arabidopsis thaliana |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571983.
| Description | E-value | Query Range |
Subject Range |
|
|
553.0 | [0..1] | [540..1] |
|
Region A: Residues: [1-250] |
1 11 21 31 41 51
| | | | | |
1 MDSLRFLRIL LLSSSILLLS LRSTVTAGDI VHQDNLAPKK PGCENDFVLV KVQTWIDGVE 60
61 NEEFVGVGAR FGKRIVSKEK NANQTHLVFA NPRDSCTPLK NKLSGDVVIV ERGNCRFTAK 120
121 ANNAEAAGAS ALLIINNQKE LYKMVCEPDE TDLDIQIPAV MLPQDAGASL QKMLANSSKV 180
181 SAQLYSPRRP AVDVAEVFLW LMAIGTILCA SYWSAWSARE AAIEHDKLLK DAIDEIPNTN 240
241 DGGSGVVEIN
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 1v6cA |
| Description: | Crystal Structure of Psychrophilic Subtilisin-like Protease Apa1 from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [251-447] |
1 11 21 31 41 51
| | | | | |
1 SISAIFFVVL ASGFLVILYK LMSYWFVELL VVVFCIGGVE GLQTCLVALL SRWFQRAADT 60
61 YVKVPFLGPI SYLTLAVSPF CIVFAVLWAV YRVHSFAWIG QDVLGIALII TVLQIVHVPN 120
121 LKVGTVLLSC AFLYDIFWVF VSKKLFHESV MIVVTRGDKS GEDGIPMLLK IPRMFDPWGG 180
181 YSIIGFGDIL LPGLLIA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [448-540] |
1 11 21 31 41 51
| | | | | |
1 FALRYDWLAN KTLRTGYFIW AMVAYGLGLL ITYVALNLMD GHGQPALLYI VPFTLGTMLT 60
61 LARKRDDLWI LWTKGEPERA CPHHVRLEQC SEK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
