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View Structure Prediction Details

Protein: RLF8_ARATH
Organism: Arabidopsis thaliana
Length: 82 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF8_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592764 - gi|21592764|gb|AAM64713.1| unknown [Arabidopsis thaliana]
160.0 [0..1] [82..1]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMSKSIKVI LSLALVVFLA LAGTKVEASV RYITYPAIDR GDHAVHCDKA HPNTCKKKQA  60
   61 NPYRRGCGVL EGCHRETGPK PT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.267606
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.291 N/A N/A a.157.1 Skp1 dimerisation domain-like
View Download 0.231 N/A N/A d.58.17 Metal-binding domain
View Download 0.206 N/A N/A a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.202 N/A N/A d.58.17 Metal-binding domain
View Download 0.201 N/A N/A a.4.1 Homeodomain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle