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View Structure Prediction Details

Protein: gi|116325968, gi...
Organism: Arabidopsis thaliana
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116325968, gi....

Description E-value Query
Range
Subject
Range
gi|3056589, gi|2... - gi|3056589|gb|AAC13900.1|AAC13900 T1F9.10 [Arabidopsis thaliana], pir||E96639 protein T1F9.10 [impor...
172.0 [0..1] [118..105]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANIRLSEE VVNKTRSFEK MKSEAERCLA QGEKLCDEKT EFENATYAKF LSVLNAKKAK  60
   61 LRAVRDKEDS VRAVEEEEST YKAESFESGR SDDEQSGEEA SEKATSSKAR GGKRAARS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.53
Match: 1z56A
Description: Co-Crystal Structure of Lif1p-Lig4p
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle