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View Structure Prediction Details

Protein: NAT7_ARATH
Organism: Arabidopsis thaliana
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT7_ARATH.

Description E-value Query
Range
Subject
Range
NAT6_ARATH - Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2
331.0 [0..8] [538..2]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGGGGGG VAPPLKHDGL EPHPVKDQLS SISYCITSPP PWPEAILLGF QHYLVMLGTT  60
   61 VLIPTYLVPQ MGGGNEEKAK MVQTLLFVSG LNTLLQSFFG TRLPAVIGGS YTYVPTTLSI 120
  121 ILAGRYSDIL DPQEKFKRIM RGIQGALIVA SILQIVVGFS GLWRNVVRLL SPLSAVPLVA 180
  181 LAGFGLYEHG FPLLAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CIEIGLPEII LLLLFSQYIP HLIRGERQVF HRFAVIFSVV IVWIYAHLLT VGGAYKNTGV  60
   61 NTQTSCRTDR SGLISGSPWI RVPYPFQWGP PTFHAGEAFA MMAVSFVSLI ESTGTYIVVS 120
  121 RFASATP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [324-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPSVLSRGV GWQGVGVLLC GLFGAGNGAS VSVENAGLLA LTRVGSRRVV QISAGFMIFF  60
   61 SILGKFGAIF ASIPAPVVAA LHCLFFAYVG AGGLSLLQFC NLNSFRTKFI LGFSVFMGLS 120
  121 IPQYFNQYTA VNKYGPVHTH ARWFNDMINV PFSSKAFVAG ILAFFLDVTM SSKDSATRKD 180
  181 RGMFWWDRFM SFKSDTRSEE FYSLPFNLNK YFPSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle