| Protein: | gi|42571293 |
| Organism: | Arabidopsis thaliana |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571293.
| Description | E-value | Query Range |
Subject Range |
|
|
477.0 | [0..1] | [536..1] |
|
|
345.0 | [0..66] | [536..2] |
|
|
342.0 | [0..66] | [536..2] |
|
|
303.0 | [0..68] | [536..2] |
|
|
294.0 | [0..75] | [536..19] |
|
|
293.0 | [0..72] | [536..7] |
|
|
283.0 | [0..66] | [536..2] |
|
|
278.0 | [0..66] | [536..4] |
|
|
276.0 | [0..64] | [512..19] |
|
|
266.0 | [0..70] | [496..7] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MSNPRQRKGE AMMNPTISWR FASSTSLLSI PRTPKSAFIF AMTFSSSSSS SSSSSSVENP 60
61 NKDDSSSSLE LVLKYHNQTK HSLNGYARGP RGLDWANQPN PFRRYLSAPL LPLQHPNHDI 120
121 D
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.557 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.505 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.466 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.393 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.393 | a.1.1 | Globin-like |
| View | Download | 0.393 | a.1.1 | Globin-like |
| View | Download | 0.368 | a.24.3 | Cytochromes |
| View | Download | 0.368 | a.24.3 | Cytochromes |
| View | Download | 0.365 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.304 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.240 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.209 | d.110.4 | SNARE-like |
|
Region A: Residues: [122-389] |
1 11 21 31 41 51
| | | | | |
1 DDSDSPLYST LFDSLPPPKP ISLPTISHLF YHSLALSAWK TTGSSTWPLR VNPSSGNLHP 60
61 TEAYLIAPPI PSLSQSAFVS HYAPKEHSLE VRAHIPSSFF PNFFPENSFL IGISSIFWRE 120
121 AWKYGERAFR YCNHDVGHAI AALSIAAADL GWDLKLLDAF GADDLKRLMG LPEFQLPEGK 180
181 GKAELPEIEF EHPDCLLLVF PNGTSREHLN LDYLAISSAL RDFPSLEWTG NPNTLSKEHL 240
241 CWDIIYRTAK AVEKPPLIYS TSSSSIDV
|
| Detection Method: | |
| Confidence: | 44.69897 |
| Match: | 1bkjA |
| Description: | Flavin reductase P (NADPH:FMN oxidoreductase) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [390-543] |
1 11 21 31 41 51
| | | | | |
1 ASFTSSRALF SHSSYNKLTV RQVVRTRRSA VDMDAVTCID MSSFYQMLMH CLPSTGESQK 60
61 EQLALPFRAL PWDTAEVHLA LFVHRVSGLP KGLYLLVRNE DHLSDLKTAT RPEFEWTKPD 120
121 GCPDNLPLYK LAEGDCQRLA KGLSCHQVQS RIEL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
