| Protein: | PUB58_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 437 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB58_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..4] | [426..1855] |
|
Region A: Residues: [1-321] |
1 11 21 31 41 51
| | | | | |
1 MVENSYVLFA RLCVELFHEL PPLPSDESHG DITTFERLFL RKCRIELENA SPKTEHLPLV 60
61 YVDETNYYRF IKTVRVLAEV YKNSKITETT RKSMIQVLMN PILPPERITD AMNLFRSIIG 120
121 KLADFHFSDE KFNQLVRSSR VVELEGNYNE EVKLRKEAED ALAMKKEDVE MMEQLLESYK 180
181 EEQGKLQLQA KALEHKLEAE LRHRKETETL LAIERDRIEK VKIQLETVEN EIDNTRLKAE 240
241 EFERKYEGEM ILRRESEIAL EKEKKELEEV KLKLETYERE QENLSSEVRT WQDKYEQESS 300
301 LRKLSEYALS REQEELQIVK G
|
| Detection Method: |  |
| Confidence: | 25.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [322-437] |
1 11 21 31 41 51
| | | | | |
1 LLEFYNGEAD AMREERDKAL KTAKEQMEKR QPPSSFFCPI TQASPNLYKK MITCITLNLE 60
61 VMKDPHFAAD GFTYEAESIR KWLSTGHQTS PMTNLRLSHL TLVPNRALRS AIEELV
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
