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View Structure Prediction Details

Protein: GDL18_ARATH
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL18_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592973 - gi|21592973|gb|AAM64922.1| myrosinase-associated protein, putative [Arabidopsis thaliana]
330.0 [0..2] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMANNCNLVS VLCVILVLTL FHNPITVAGQ NSPVVALFTF GDSNFDAGNK QTLTKTLVAQ  60
   61 GFWPYGKSRD DPNGKFSDGL ITPDFLAKFM KIPLAIAPAL QPNVNVSRGA SFAVEGATLL 120
  121 GAPVESMTLN QQVKKFNQMK AANWNDDFVA KSVFMIYIGA NDYLNFTKNN PTADASAQQA 180
  181 FVTSVTNKLK NDISALYSSG ASKFVIQTLA PLGCLPIVRQ EYNTGMDQCY EKLNDLAKQH 240
  241 NEKIGPMLNE MARNSPASAP FQFTVFDFYN AVLTRTQRNQ NFRFFVTNAS CCGVGSHDAY 300
  301 GCGLPNVHSK LCEYQRSFLF FDGRHNSEKA QEMFAHLLFG ADTNVVQPMN VRELTVYPVD 360
  361 EPMREFWVPP TPATVHASDS SSSTSRGYEY Y

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.13
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle