| Protein: | gi|186490375, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 269 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186490375, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..1] | [268..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MAGWQKNLQI VIRQVGKRVK DSHISTANYS STRNLESPFS QGYLQSLLRS TYSSRPLYYH 60
61 LQQLGISTSR QLQAGEEPVS SPLSSPALLG SGKEEE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.388 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.366 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.357 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.315 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [97-269] |
1 11 21 31 41 51
| | | | | |
1 QKIIPKRQKV QAVLKSIKQS PKKVNLVAAL VRGMRVEDAL MQLQVTVKRA SQTVYRVIHA 60
61 ARANATHNHG LDPDRLLVAE AFVGKGLFGK KVAYHAKGRS GIISIPRCRL TVIVRETTAE 120
121 EEAEIARLKV HNFKKLNKRQ RQLVPHKLIE TSPIWNRRGT KGNHRSSELV PSH
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1j5aL |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 3.74646085398859 | bayes_pls_golite062009 |
| structural molecule activity | 3.45819635360209 | bayes_pls_golite062009 |
