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View Structure Prediction Details

Protein: PDI15_ARATH
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDI15_ARATH.

Description E-value Query
Range
Subject
Range
gi|114670980 - gi|114670980|ref|XP_001164327.1| PREDICTED: prolyl 4-hydroxylase, beta subunit isoform 5 [Pan troglo...
379.0 [0..72] [523..19]

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Predicted Domain #1
Region A:
Residues: [1-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIPKPISK VSTFTFILLI LLSFTIIIAY SSPDSNVESN EPGFDSDLDQ LLAVDEQLQE  60
   61 DRPEQQSEAE TVSKAQRIVL ELNGDYTKRV IDGNEFVMVL GYAPWCARSA ELMPRFAEAA 120
  121 TALKEIGSSV LMAKIDGDRY SKIASELEIK GFPTLLLFVN GTSLTYNGGS SAEDIVIWVQ 180
  181 KKTGAPIITL NTVDEAPRFL DKYHTFVLGL FEKFEGSEHN EFVKAAKSDD EIQFIETRDS 240
  241 DVAKLLFPDL KSNNVFIGLV KPEAERYTVY DGSYKMEKIL EFLGSNKFPL FTKLTETNTV 300
  301 WVYSSPVKLQ VMLFSKADDF QKLAQPLEDI ARKFKSKLMF IYVDITNENL AMPFLILFGI 360
  361 EAGNKTVVAA FDNNLNSKYL LESDPSPNSI EEFCSGLAHG TVSRYYRSEP VPDNENASIV 420
  421 TVVGKTFDGL VLNSRENVLL EVHTPWCVNC EALSKQIEKL AKHFKGFENL VFARIDASAN 480
  481 EHTKLQVDDK YPIILLYKSG EKEKPLKLST KLSAKDIAVF INEELLKPKN GSAKDEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle