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View Structure Prediction Details

Protein: gi|15218050
Organism: Arabidopsis thaliana
Length: 865 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15218050.

Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK  60
   61 PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY LIKATFVYGN YDGLNVGPNF 120
  121 DLYFGPNLWT TVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR 180
  181 FPDDVYDRKW YPYFDNSWTQ VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE 240
  241 PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS PKPLKTETIY DKIPEQCDGG 300
  301 ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP 360
  361 CVPKLFLWDG LNCN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.221849
Match: 2id5A
Description: No description for 2id5A was found.

Predicted Domain #2
Region A:
Residues: [375-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSDNSTSPII TSLDLSSSGL TGSITQAIQN LTNLQELDLS DNNLTGEIPD FLGDIKSLLV  60
   61 INLSGNNLSG SVPPSLLQKK GMKLNVEGNP HLLCTADSCV KKGEDGHKKK SVIVPVVASI 120
  121 ASIAVLIGAL VLFFILRKKK SPKVEGP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [522-865]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPSYMQASDG RSPRSSEPAI VTKNRRFTYS QVAIMTNNFQ RILGKGGFGM VYHGFVNGTE  60
   61 QVAVKILSHS SSQGYKEFKA EVELLLRVHH KNLVGLVGYC DEGENMALIY EYMANGDLKE 120
  121 HMSGTRNRFT LNWGTRLKIV VESAQGLEYL HNGCKPPMVH RDVKTTNILL NEHFQAKLAD 180
  181 FGLSRSFPIE GETHVSTVVA GTPGYLDPEY YKTNWLTEKS DVYSFGIVLL ELITNRPVID 240
  241 KSREKPHIAE WVGVMLTKGD INSIMDPNLN EDYDSGSVWK AVELAMSCLN PSSARRPTMS 300
  301 QVVIELNECI ASENSRGGAS RDMDSKSSIE VSLTFDTELS PTAR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle