| Protein: | BH095_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 308 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BH095_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
175.0 | [0..1] | [276..1] |
|
|
152.0 | [0..51] | [297..409] |
|
|
149.0 | [0..51] | [297..409] |
|
|
143.0 | [0..60] | [301..78] |
|
|
141.0 | [0..21] | [297..376] |
|
|
141.0 | [0..21] | [297..377] |
|
|
141.0 | [0..21] | [297..377] |
|
|
141.0 | [0..21] | [297..372] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV KKGKKRTKRN 60
61 DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP PKADKSTIVD EAVSSIKSLE 120
121 QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA YAPSSSSSPT ALLTPISNHP IDATATDSYP 180
181 RAAFLADQVS SSSAAAANLP YPCNDPIVNF DTW
|
| Detection Method: |  |
| Confidence: | 16.0 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [214-308] |
1 11 21 31 41 51
| | | | | |
1 SSRNVVLTIC GNEAFFNLCV PKHKPGVFTS VCYLFEKYNM EVLFANVSSN VFWSTYVIQA 60
61 QVNPSCENQL LGNGLGVVDV FKQVSQELVL YFSSL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.837 | d.58.7 | RNA-binding domain, RBD |
