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View Structure Prediction Details

Protein: PME57_ARATH
Organism: Arabidopsis thaliana
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME57_ARATH.

Description E-value Query
Range
Subject
Range
PME18_ARATH - Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2
291.0 [0..3] [244..172]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMIGVMEDS KLHEDMENDM LGDLTSRARE ALALFISISL RDNTELNLVV PNGPSWLSHV  60
   61 DKKDLYLNDE TLKKITDILV AKDVTGNYNI VNVAIAAAPQ HSQKRFVIYI KTSIYVEIVV 120
  121 IGNMKSNLTL IADGQDSTII TFNLSSSNSK RTFNTATFAS NGDGFIRVDM CFRNTTWPVK 180
  181 GPVVTLRVNG DMSIIYRCRV EEYQDALYPH KNRQCYREYF LMDTVDFICG NAAAVFQFCQ 240
  241 IVHMDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.69897
Match: 1xg2A
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle