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View Structure Prediction Details

Protein: WAXSA_ARATH
Organism: Arabidopsis thaliana
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WAXSA_ARATH.

Description E-value Query
Range
Subject
Range
WAXS8_ARATH - Probable long-chain-alcohol O-fatty-acyltransferase 8 OS=Arabidopsis thaliana GN=At1g34520 PE=3 SV=1
260.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEELKSFVK VWGSAIISVS YCYYIPSKIK RGVHRLLSVL PVCVLFLVLP LFFVFTIFSS  60
   61 TTAFCLSILA NFKLILFAFD KGPLLPLPTN LFRFICFTCL PIKLQTKPNS QNHLPKWVLP 120
  121 SKV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.716 N/A N/A a.151.1 Glutamyl tRNA-reductase dimerization domain
View Download 0.708 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.604 N/A N/A a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.529 N/A N/A a.130.1 Chorismate mutase II
View Download 0.529 N/A N/A a.4.5 "Winged helix" DNA-binding domain

Predicted Domain #2
Region A:
Residues: [124-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIFVLLLNIR SYKILLPPIL LLGLYPLHLY IVLDVLLTIV NALLTIILRC DLEPHFNEPY  60
   61 LATSLQDFWG HRWNLMVSAI YRPGVYSPVR SVCQHQMRSD WARFMGCMTT FFVSGLIHEL 120
  121 VYFYINREKP TLEVTWFFVL HGVCTAMEIA VKRKMQWSLS PMLLRLITVG FLVVTGDLLF 180
  181 FGQIERSNML ERRANEASLF IDFVKRKVFN YTVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle