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View Structure Prediction Details

Protein: gi|42570227
Organism: Arabidopsis thaliana
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42570227.

Description E-value Query
Range
Subject
Range
LOL1_ARATH - Protein LOL1 OS=Arabidopsis thaliana GN=LOL1 PE=2 SV=1
199.0 [0..54] [187..21]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTWKNQIFS DSQFVLLFMG KNCSIIFPEP HLFISHVFII HLNVLFLVKK INKNNLRFVG  60
   61 STSGQSQLVC SGCRNLLMYP VGATSVCCAV CNAVTAVPPP GTEMAQLVCG GCHTLLMYIR 120
  121 GATSVQCSCC HTVNLALEAN QVAHVNCGNC MMLLMYQYGA RSVKCAVCNF VTSVGGSTST 180
  181 TDSKFNN

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle