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View Structure Prediction Details

Protein: gi|18397793
Organism: Arabidopsis thaliana
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18397793.

Description E-value Query
Range
Subject
Range
UAP1_ARATH - UDP-N-acetylglucosamine diphosphorylase 1 OS=Arabidopsis thaliana GN=GLCNAC1PUT1 PE=1 SV=1
210.0 [0..1] [152..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEPSMEREN GALTAATTTT TAVTSPPPMA SSPRQALVER LKDYGQEDIF SLWDELSPDE  60
   61 KDFLVRDIEN LDLPRIDRII RCSLHSQGLP VAAIEPVPEN WVSTVDGRTM EDREKWWKMG 120
  121 LKTIYEGKLG VVLLSGGQGT RLGSSDPKGC FSE

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Detection Method: PSI-BLAST
Confidence: 43.09691
Match: 1vm8A
Description: Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle