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View Structure Prediction Details

Protein: gi|30691791
Organism: Arabidopsis thaliana
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30691791.

Description E-value Query
Range
Subject
Range
NFYA7_ARATH - Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1
229.0 [0..1] [186..1]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY  60
   61 PDPYY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSIFAPPPQP YTGLMGVQQQ GVPLPSDAVE EPVFVNAKQY HGILRRRQSR ARLESQNKVI  60
   61 KSRKPYLHES RHLHAIRRPR GCGGRFLNAK KEDEHHEDSS HEEKSNLSAG KSAMAASSGT 120
  121 S

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 37.0
Match: PF02045.6
Description: No description for PF02045.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle