YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SAU65_ARATH
Organism: Arabidopsis thaliana
Length: 148 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAU65_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553494 - gi|21553494|gb|AAM62587.1| auxin-induced protein, putative [Arabidopsis thaliana]
190.0 [0..1] [148..1]

Back

Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINTKKLLKM AKKWQQRAAL KRKRISFQRS TTTTTTTTTT TSSSTAVEKG CFVVYTVDKI  60
   61 RFAFPLSYLN NSVFEELLKI SEEEFGLRAG GPITLPFDSV FLEYLIKFIE RRMDGDTEKA 120
  121 LLMSISSARC SMQPQEQQSG YTQQLLVF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.30103
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.296 N/A N/A d.199.1 DNA-binding C-terminal domain of the transcription factor MotA
View Download 0.296 N/A N/A d.199.1 DNA-binding C-terminal domain of the transcription factor MotA
View Download 0.276 N/A N/A c.54.1 IIA domain of mannose transporter, IIA-Man
View Download 0.259 N/A N/A c.54.1 IIA domain of mannose transporter, IIA-Man
View Download 0.254 N/A N/A d.61.1 LigT-like
View Download 0.254 N/A N/A d.61.1 LigT-like
View Download 0.227 N/A N/A a.1.1 Globin-like
View Download 0.227 N/A N/A a.1.1 Globin-like
View Download 0.222 N/A N/A a.131.1 Peridinin-chlorophyll protein


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle