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View Structure Prediction Details

Protein: gi|42571379
Organism: Arabidopsis thaliana
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571379.

Description E-value Query
Range
Subject
Range
TRL4_ARATH - Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana GN=At1g07700 PE=2 SV=1
197.0 [0..1] [171..1]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLLNISHC SYHGYSGLTS RGGINTVENH RWVWHNNGVR LSFPRAESSI NITMGCTLQR  60
   61 GIAKSLSQEN LVELSDENDD LCPVECVTEF KTDDELLSVL EKSKETNSLV VVDFYRTACG 120
  121 SCKYIEQGFS KLCKQSGDQE APVIFLKHNV VDEYDEQSEV AERLRIKVIP L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle