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View Structure Prediction Details

Protein: gi|42571381
Organism: Arabidopsis thaliana
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571381.

Description E-value Query
Range
Subject
Range
TRL4_ARATH - Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana GN=At1g07700 PE=2 SV=1
179.0 [0..16] [217..3]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLLWFCFK ILIFDSNLQI SHCSYHGYSG LTSRGGINTV ENHRWVWHNN GVRLSFPRAE  60
   61 SSINITMGCT LQRGIAKSLS QENLVELSDE NDDLCPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2h8lA
Description: No description for 2h8lA was found.

Predicted Domain #2
Region A:
Residues: [98-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ECVTEFKTDD ELLSVLEKSK ETNSLVVVDF YRTACGSCKY IEQGFSKLCK QSGDQEAPVI  60
   61 FLKHNVVDEY DEQSEVAERL RIKAVPLFHF YKNGVLLESF ATRDKERIDA AILKYTSSES 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 2j23A
Description: No description for 2j23A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle