YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MYO7_ARATH
Organism: Arabidopsis thaliana
Length: 1730 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for MYO7_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1078]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASAKVTVG SHVWVEDPDD AWIDGEVEEV NSEEITVNCS GKTVVAKLNN VYPKDPEFPE  60
   61 LGVDDMTKLA YLHEPGVLLN LKCRYNANEI YTYTGNILIA VNPFKRLPHL YGSETMKQYK 120
  121 GTAFGELSPH PFAVADSAYR KMINEGVSQA ILVSGESGAG KTESTKMLMQ YLAYMGGRAE 180
  181 SEGRSVEQQV LESNPVLEAF GNAKTVRNNN SSRFGKFVEI QFDQRGRISG AAIRTYLLER 240
  241 SRVCQVSDPE RNYHCFYMLC AAPEQETERY KLGKPSTFRY LNQSNCYALD GLDDSKEYLA 300
  301 TRKAMDVVGI NSEEQDGIFR VVAAILHLGN IEFAKGEESE ASEPKDEKSR FHLKVAAELF 360
  361 MCDGKALEDS LCKRVMVTRD ESITKSLDPD SAALGRDALA KIVYSKLFDW LVTKINNSIG 420
  421 QDPNSKHIIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FNQHVFKMEQ EEYTKEEIDW 480
  481 SYIEFIDNQD VLDLIEKKPG GIIALLDEAC MFPRSTHDTF AQKLYQTFKN HKRFGKPKLA 540
  541 QTDFTICHYA GDVTYQTELF LDKNKDYVVG EHQALLSSSD CSFVSSLFPP LPEESSKTSK 600
  601 FSSIGSQFKQ QLQSLLESLS TTEPHYIRCV KPNNLLKPDI FENINILHQL RCGGVMEAIR 660
  661 ISCAGYPTRK PFNEFLTRFR ILAPETTKSS YDEVDACKKL LAKVDLKGFQ IGKTKVFLRA 720
  721 GQMAEMDAHR AEVLGHSARI IQRNVLTYQS RKKFLLLQAA STEIQALCRG QVARVWFETM 780
  781 RREAASLRIQ KQARTYICQN AYKTLCSSAC SIQTGMRAKA ARIELQLRKK RRATIIIQSQ 840
  841 IRRCLCHQRY VRTKKAAITT QCGWRVKVAR RELRNLKMAA KETGALQDAK TKLENQVEEL 900
  901 TSNLELEKQM RMEIEEAKSQ EIEALQSVLT DIKLQLRDTQ ETKSKEISDL QSVLTDIKLQ 960
  961 LRDTQETKSK EISDLQSALQ DMQLEIEELS KGLEMTNDLA AENEQLKESV SSLQNKIDES1020
 1021 ERKYEEISKI SEERIKDEVP VIDQSAIIKL ETENQKLKAL VSSMEEKIDE LDRKHDET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [1079-1301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPNITEKLKE DVSFDYEIVS NLEAENERLK ALVGSLEKKI NESGNNSTDE QEEGKYILKE  60
   61 ESLTEDASID NERVKKLADE NKDLNDLVSS LEKKIDETEK KYEEASRLCE ERLKQALDAE 120
  121 TGLIDLKTSM QRLEEKVSDM ETAEQIRRQQ ALVNSASRRM SPQVSFTGAP PLENGHQEPL 180
  181 APIPSRRFGT ESFRRSRIER QPHEFVDVLL KCVSKNIGFS HGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [1302-1730]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVAALTIYKC LMRWKIFEAE KTSIFDRIVP VFGSAIENQE DDNHLAYWLT NTSTLLFLLQ  60
   61 RSLRQQSSTG SSPTKPPQPT SFFGRMTQGF RSTSSPNLST DVVQQVDARY PALLFKQQLT 120
  121 AYVETMYGII RENVKREVSS LLSSCIQSLK ESSCDSSVVN SPSKSSEENL PAKSSEENSP 180
  181 KKSSEENSPK ESSGDKSPQK LSDDNSPSKE GQAVKSSEEN SPASSWQSII EFLNYILITW 240
  241 KKNYVPLFLV QKMFSQTFQY INVQLFNSLL LEREYCTVNM GIKVKAGLDE LESWCSQATE 300
  301 EFVGSSWDEL KHTRQAVVLL VTEPKSTITY DDLTINLCSV LSTEQLYRIC TLCKDKDDGD 360
  361 HNVSPEVISN LKLLLTNEDE NSRSFLLDDD SSIPFDTDEI SSCMQEKDFA NVKSASELAD 420
  421 NPNFLFLKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 2f6hX
Description: Myosin V cargo binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle