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View Structure Prediction Details

Protein: VA726_ARATH
Organism: Arabidopsis thaliana
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VA726_ARATH.

Description E-value Query
Range
Subject
Range
VA725_ARATH - Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2
262.0 [0..1] [220..66]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD  60
   61 NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST AKANSLNKEF GSKLKEHMQY 120
  121 CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG 180
  181 TKMKRKLWFE NMKIKLIVFG IIVALILIII LSVCHGFKCT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2nupC
Description: No description for 2nupC was found.

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