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View Structure Prediction Details

Protein: gi|42571373, gi|...
Organism: Arabidopsis thaliana
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571373, gi|....

Description E-value Query
Range
Subject
Range
gi|114596709 - gi|114596709|ref|XP_001139385.1| PREDICTED: similar to methyl sterol oxidase [Pan troglodytes]
182.0 [0..18] [226..142]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLPFMVNT YFSFVPMQTK NNTPAAQGKC ITRLLLYHFS VNLPLMLASY PVFRAMGMRS  60
   61 SFPLPSWKEV SAQILFYFII EDFVFYWGHR ILHSKWLYKN VHSVHHEYAT PFGLTSEYAH 120
  121 PAEILFLGFA TIVGPALTGP HLITLWLWMV LRVLETVEAH CGYHFPWSLS NFLPLYGGAD 180
  181 FHDYHHRLLY TKSGNYSSTF VYMDWIFGTD KGYRRLKTLK ENGDMKQT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.124939
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle