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View Structure Prediction Details

Protein: MYO8_ARATH
Organism: Arabidopsis thaliana
Length: 1500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for MYO8_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1073]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP  60
   61 ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI AVNPFRRLPH LYSSHMMTQY 120
  121 KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG 180
  181 AATEGRTVEQ KVLESNPVLE AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL 240
  241 ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY 300
  301 HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE 360
  361 LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA LAKVMYSRLF DWLVEKINTS 420
  421 IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI 480
  481 NWSYIEFVDN QDILDLIEKK PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK 540
  541 LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS 600
  601 KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI 660
  661 RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK LLDKAGLEGY QIGKSKVFLR 720
  721 AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG 780
  781 MRREAAALKI QRDLRKFLAR KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT 840
  841 RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE 900
  901 LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI 960
  961 IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL HETARISQDR LKQALAAESK1020
 1021 VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [1074-1500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HRTNLENQFN EVEVNGNAGK SAAERQLENV DTLIDCVKEN IGFSNGKPIA AFTIYKCLLH  60
   61 WKCFESEKTS AFDRLIEMIG SAIENEDDNG HLAYWLTNTS ALLFLLQKSL KPAGAGATAS 120
  121 KKPPITTSLF GRMALSFRSS PNLAAAAEAA ALAVIRPVEA KYPALLFKQQ LAAYVEKIFG 180
  181 MIRDNLKKEL SALISMCIQA PRISKGGIQR SARSLGKDSP AIHWQSIIDG LNSLLAILKD 240
  241 NYVPLVLIQK IHTQTFSFVN VQLFNSLLLR KECCTFSNGE FVKSGLAELE LWCGQVNEYA 300
  301 GPSWDELKHI RQAVGFLVIH QKYRVSYDDI VHDLCPILSV QQLYRICTLY WDDCYNTRSV 360
  361 SQEVISSMRA LMTEESNDAD SNSFLLDDNS SIPFSIDEIS NSMHEKDFAS VKPAKELLEN 420
  421 PEFVFLH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2f6hX
Description: Myosin V cargo binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle