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View Structure Prediction Details

Protein: gi|63003786, gi|...
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|63003786, gi|....

Description E-value Query
Range
Subject
Range
gi|114770708, gi... - gi|114770708|ref|ZP_01448198.1| putative methylisocitrate lyase [alpha proteobacterium HTCC2255], gi...
gi|114770708 - gi|114770708|ref|ZP_01448198.1| putative methylisocitrate lyase [alpha proteobacterium HTCC2255]
gi|221133519 - gi|221133519|ref|ZP_03559824.1| 2-methylisocitrate lyase [Glaciecola sp. HTCC2999]
302.0 [0..38] [336..2]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLMAAKST SLFSSNPTIS AKIGQNPRGV RSVYPTVRMQ SRVHRLIEEQ GAVLIPGVYD  60
   61 ALSAAIVQQT GFSAALISGY ALSAVTLGKP DFGLITPPEM AATARSVCAA APKIPIIADA 120
  121 DTGGGNALNV QRTVKDLIAA GAAGCFLEDQ AWPKRCGHMR GKEVIPAEEH AAKIASARDA 180
  181 IGDADFFLIA RTDARALSAK TGLSDAIDRA NLYMEAGADA SFVEAPRDDD ELKEIGRRTK 240
  241 GYRLCNMLEG GRTPLHTPDE LKEMGFHLIA HPLTSLYAST RALVDVLKIL KEKGTTKDHL 300
  301 EKMITFEEFN RLVNLDSWYE LETKYSNLRN ALGETK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.30103
Match: 1zlpA
Description: Petal death protein PSR132 with cysteine-linked glutaraldehyde forming a thiohemiacetal adduct
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle