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View Structure Prediction Details

Protein: gi|15218978, gi|...
Organism: Arabidopsis thaliana
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15218978, gi|....

Description E-value Query
Range
Subject
Range
gi|28393587 - gi|28393587|gb|AAO42213.1| unknown protein [Arabidopsis thaliana]
326.0 [0..1] [342..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSYPIGSSK AFHAYSRSGD FDLESGGTIR KSRKPKTSFS KMIKSLGNRL HHMFKLHPVL  60
   61 VFVVCVSFGI TVLILVSSIY GNRLGSTVSY YKKNDLDSDG YPFAN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKNLVMVAGH SVYTSSDCGK VEKEDSWFLE SYQKNPGQAA TFLSHIQEGV EAAAKDDESL  60
   61 LLFSGGETRK DAGPRSEAQS YWAVAESKGW FGKNEVRSRA LTEEHARDSF ENLLFSVCRF 120
  121 RELTGSYPQN ITVVSYDFKE ERFAHLHRSA MGFPESRFFY LGTPASLSSK EGALKGEALV 180
  181 RSQFQEDPYG CVGSLWRKKL NRDPFHRTIP YPIGCPEIGG LFRYCGSAPF PGSLPWG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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