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View Structure Prediction Details

Protein: DOF12_ARATH
Organism: Arabidopsis thaliana
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOF12_ARATH.

Description E-value Query
Range
Subject
Range
DOF35_ARATH - Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1
188.0 [0..26] [154..13]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ  60
   61 PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR FGRNENRPDG LINQDDGFQS 120
  121 SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.69897
Match: PF02701.6
Description: No description for PF02701.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDSPITTTTH ALESLSWDIC QETDVDLGFY GEFNNLTQKT KEDQEVFGQF LQEDREEIFE  60
   61 FQGLLDDKEI QEILECSFSE EPDQLVSQGS FMINGDNWSS TDLTRFGI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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